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3 Assays visible to you, out of a total of 19

TANDEM MASS SPECTROMETRY (GC) Xcalibur GUI

Source Specimen Material Type Organism Strain or Line Organism Part Organism Status Sex Age Age Time Unit Sampling Time Point Sampling Time Point Unit Temperature Temperature Unit pH Atmosphere Compound Media Nutrients Fold Change Assignment Name Fold Change Assignment Feature acidiphiliumacidithrixsup2 wholeorganism Acidiphilium C61 whole culture fresh n/a n/a n/a Acidithrix supernatant acidiphiliumacidithrixsup1 wholeorganism Acidiphilium C61 ...

Experiment Design: growthconditiondesign, co-expressiondesign Experimental Factor: Compound, Organism, Strain Experimental Factor Type: compound, organism, strainorline Quality Control Type: technicalreplicate, biological_replicate

Specimen Material Type Organism Strain or Line Organism Part Organism Status Sex Age Age Time Unit Sampling Time Point Sampling Time Point Unit Temperature Temperature Unit pH Atmosphere Compound Media Nutrients Fold Change Assignment Name Fold Change Assignment ...

RNA-seq We study the transcriptional landscape of C. glabrata and identify differentially expressed genes between pH4 and ph8 as well as between nitrosative stress (GSNO) treatment and controll. Candida glabrata was grown in standard nutrient-rich medium, ph4, ph8 and in GSNO conditions. Paired-end and strand-specific RNA-Seq was performed on three biological replicates after PolyA filtering. A fourth replicate without filtering was sequenced single-end and not strand-specific.

Experiment Design: ...

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