Sticking together: Inter-species aggregation of bacteria isolated from iron snow iscontrolled by chemical signaling

This project aims to gather data and metadata from first funding period projects that have not been continued during the second funding period

We investigated the role of chemical signaling between two co-occurring bacteria that each make up more than 10% of the community in iron-rich lakes aggregates (iron snow) by comparative metagenomics and propose a model that shows rapid iron snow formation and ultimately energy transfer from the photic zone to deeper water layers are controlled via a chemically mediated interplay.

TANDEM MASS SPECTROMETRY (GC) Xcalibur GUI

Source
Specimen Material Type Organism Strain or Line Organism Part Organism Status Sex Age Age Time Unit Sampling Time Point Sampling Time Point Unit Temperature Temperature Unit pH Atmosphere Compound Media Nutrients Fold Change Assignment Name Fold Change Assignment Feature
acidiphilium_acidithrix_sup_2 whole_organism Acidiphilium C61 whole culture fresh n/a n/a n/a Acidithrix supernatant
acidiphilium_acidithrix_sup_1 whole_organism Acidiphilium C61
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Experiment Design: growth_condition_design, co-expression_design
Experimental Factor: Compound, Organism, Strain
Experimental Factor Type: compound, organism, strain_or_line
Quality Control Type: technical_replicate, biological_replicate

Specimen Material Type Organism Strain or Line Organism Part Organism Status Sex Age Age Time Unit Sampling Time Point Sampling Time Point Unit Temperature Temperature Unit pH Atmosphere Compound Media Nutrients Fold Change Assignment Name Fold Change Assignment
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